Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ACSL6-212ENST00000431707 2060 ntTSL 5 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 PPP2R3C-213ENST00000555644 1347 ntTSL 2 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 ALDH7A1P1-201ENST00000510973 1533 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 VIT-208ENST00000497382 2650 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 GABRB3-203ENST00000400188 1900 ntTSL 2 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 NR2F2-202ENST00000394171 3501 ntTSL 2 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 DPF3-215ENST00000610283 4520 ntTSL 2 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 CARD8-213ENST00000519940 2056 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 LINC01531-202ENST00000536898 3312 ntTSL 2 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 SEMA4A-205ENST00000368286 3135 ntTSL 5 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 ADAMTS12-201ENST00000352040 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 CCT7P2-201ENST00000479109 1454 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 SYNE1-203ENST00000354674 3154 ntTSL 5 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 AL136087.1-201ENST00000305491 426 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 BPNT1-202ENST00000354807 1152 ntTSL 5 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 SNORA71E-201ENST00000365032 132 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 MYOF-203ENST00000371488 763 ntTSL 2 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 MIR503-201ENST00000385270 71 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 TRBV20-1-201ENST00000390394 413 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 VAMP8-202ENST00000409760 805 ntTSL 3 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 COPS5P1-201ENST00000415778 785 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 TRPC6P-201ENST00000421233 880 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 SSU72P1-201ENST00000449911 583 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 ASS1P12-201ENST00000452496 1227 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 AC233724.11-201ENST00000508480 404 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 AC233724.2-201ENST00000515727 271 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 RNA5SP409-201ENST00000516815 109 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 AC024451.3-201ENST00000517810 463 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 IGLVV-58-201ENST00000520445 304 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 PRR5L-209ENST00000527487 740 ntTSL 3 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 TUBB4BP1-201ENST00000545422 178 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 TRBV7-1-201ENST00000547918 380 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 HCCAT5-201ENST00000569990 1079 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 AC064805.1-201ENST00000581412 529 ntTSL 4 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 AC009831.3-201ENST00000582538 586 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 ZRANB2-AS2-206ENST00000583678 551 ntTSL 4 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 NF1P9-202ENST00000629550 966 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 Z84468.1-202ENST00000630584 667 ntTSL 2 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 HFE2-207ENST00000636675 1280 ntTSL 5 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 CDCA7-201ENST00000306721 2789 ntTSL 2 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 AL356961.1-201ENST00000567967 1923 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 AL356235.1-201ENST00000602791 2363 ntTSL 2 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 PRAMEF1-201ENST00000332296 2160 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 ATP6V1C1-203ENST00000518857 1501 ntTSL 2 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 RAD17-205ENST00000354868 3060 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 ZNF615-215ENST00000618487 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 ASH2LP2-201ENST00000453999 1561 ntBASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 SLC11A2-209ENST00000547198 2486 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 HHAT-202ENST00000367009 2714 ntTSL 2 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 EOMES-203ENST00000461503 2080 ntTSL 2 BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 ESRRG-207ENST00000366940 5314 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NPIPA3F8WFD2 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 PTPN12-203ENST00000415482 2316 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 URGCP-202ENST00000402306 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 NFYA-201ENST00000341376 3811 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 BTN3A2-204ENST00000396948 1494 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 ITIH4-212ENST00000485816 2990 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 GOLGA6D-202ENST00000618219 3210 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC093904.4-201ENST00000565044 3273 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 DCX-210ENST00000637453 2275 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 LDHC-207ENST00000541669 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 RBMX2-201ENST00000305536 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 TOM1L1-210ENST00000572158 1521 ntAPPRIS ALT1 TSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 OR13D1-201ENST00000318763 1107 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 KRTDAP-201ENST00000338897 491 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 ZNF880-201ENST00000344085 496 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 RN7SKP249-201ENST00000365490 355 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 CNST-201ENST00000366511 645 ntTSL 3 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 SPACA5-202ENST00000376940 571 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 SPINK4-202ENST00000379725 533 ntTSL 3 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC132008.1-201ENST00000394682 286 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AL136968.1-201ENST00000403053 946 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 MED20-203ENST00000409060 815 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC078777.1-201ENST00000425371 777 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 HSD52-201ENST00000425914 1111 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 IFNWP18-201ENST00000437472 591 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 IFNWP9-201ENST00000448683 591 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 TDRG1-204ENST00000451810 919 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 FTLP18-201ENST00000453860 523 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 KRTDAP-203ENST00000484218 451 ntTSL 2 BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms