Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RRN3P1-203ENST00000551681 1151 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 LINC02304-201ENST00000554445 445 ntTSL 3 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 OTX2-206ENST00000555006 1279 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 AC120045.1-202ENST00000567770 1068 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 RPL17-205ENST00000579408 859 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 AP001469.1-202ENST00000626933 695 ntTSL 5 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 AL157931.2-201ENST00000635091 463 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 RBMY1A1-204ENST00000439108 1879 ntAPPRIS P5 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 CELF2-207ENST00000609692 2210 ntTSL 5 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 C9orf84-202ENST00000374283 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 GPD2-213ENST00000540309 1961 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 TRO-208ENST00000420798 3613 ntTSL 2 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 PDZK1-201ENST00000344770 2084 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 BROX-208ENST00000539697 3734 ntTSL 2 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 UVSSA-201ENST00000324803 4441 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 HIP1-207ENST00000616821 3120 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 PXYLP1-207ENST00000508812 4158 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 SAMD12-201ENST00000314727 2172 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 FRG2LP-201ENST00000586090 1563 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 MYHAS-201ENST00000587182 2274 ntTSL 5 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 ZNF135-203ENST00000401053 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 GRM7-204ENST00000402647 2034 ntTSL 5 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 PANX3-201ENST00000284288 1667 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 NTN4-202ENST00000344911 3152 ntTSL 5 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 BPNT1-201ENST00000322067 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 IKZF3-209ENST00000377952 1435 ntTSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 SLC25A44-202ENST00000423538 3662 ntTSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 LPCAT2BP-201ENST00000420263 1534 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 CLASP2-202ENST00000333778 1989 ntTSL 2 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 TNFRSF11B-201ENST00000297350 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 DDIAS-207ENST00000528759 3278 ntTSL 2 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 SUMO2-201ENST00000314523 809 ntTSL 2 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 TRBV7-6-201ENST00000390374 392 ntAPPRIS P1 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 AC079834.1-201ENST00000414016 421 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 SLC25A5P4-201ENST00000418448 869 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 NLGN4Y-AS1-201ENST00000434164 532 ntTSL 5 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 KCNH1-IT1-201ENST00000438597 626 ntTSL 3 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 GAPDHP52-201ENST00000449535 942 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 RN7SL666P-201ENST00000460953 304 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 RN7SL461P-201ENST00000484915 282 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 AC104116.1-201ENST00000504539 411 ntTSL 5 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 AC103719.1-201ENST00000517994 581 ntTSL 4 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 AC090568.2-201ENST00000523254 497 ntTSL 4 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 AL136418.1-201ENST00000551799 975 ntTSL 3 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 AC008972.1-201ENST00000607027 640 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 Metazoa_SRP.206-201ENST00000612004 332 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 Metazoa_SRP.148-201ENST00000614489 291 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 AC092611.3-201ENST00000624858 718 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 RDM1-229ENST00000639942 420 ntTSL 5 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 FBXO3-201ENST00000265651 2397 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 URM1-204ENST00000452446 2944 ntTSL 2 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 EEF1A1P8-201ENST00000419025 1388 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 UBR5-AS1-201ENST00000499653 2048 ntTSL 2 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 MOV10L1-205ENST00000395858 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 TRAPPC6B-202ENST00000347691 3229 ntTSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 SPIN3-205ENST00000638289 4614 ntAPPRIS P1 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 AC108704.2-201ENST00000623017 1565 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 NLRP12-204ENST00000391773 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 AL590999.1-202ENST00000607215 3053 ntBASIC8.81□□□□□ -1
NPIPA3F8WFD2 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
NPIPA3F8WFD2 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NPIPA3F8WFD2 PATE3-201ENST00000445202 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 FLT1P1-201ENST00000451650 1320 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 DNAJC3-201ENST00000376795 2273 ntTSL 5 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 RAD17-213ENST00000509734 3233 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 ZSCAN9-201ENST00000252207 1621 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 PKMP5-201ENST00000454707 1601 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 RARB-201ENST00000330688 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 TMEM254-205ENST00000372281 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 CCDC13-AS1-201ENST00000418161 2049 ntTSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 FLJ40194-201ENST00000322227 2317 ntTSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 AC237221.2-201ENST00000624231 2537 ntBASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 352.9 ms