Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 AL121832.2-201ENST00000610979 668 ntBASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 PLK5-205ENST00000642079 1969 ntBASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN16Q9Y5I7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 ID1-201ENST00000376105 1233 ntBASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 TSPY6P-201ENST00000448518 926 ntBASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 AF201337.1-201ENST00000520239 748 ntBASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 AC104771.1-201ENST00000603335 964 ntBASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN16Q9Y5I7 CLDN5-201ENST00000403084 2357 ntBASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 GPX1P1-201ENST00000388829 606 ntBASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 HLA-L-209ENST00000420110 1011 ntBASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 AC069236.1-201ENST00000604339 616 ntBASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN16Q9Y5I7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 AC010980.2-201ENST00000587099 1412 ntBASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 AC105036.2-201ENST00000569468 176 ntBASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN16Q9Y5I7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 AC100791.3-201ENST00000617619 330 ntBASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 AC121338.2-201ENST00000622535 1744 ntBASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN16Q9Y5I7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 AL109923.1-201ENST00000618799 583 ntBASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN16Q9Y5I7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CLDN16Q9Y5I7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN16Q9Y5I7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms