Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PRORSD1P-201ENST00000295112 541 ntBASIC28.42■■■□□ 2.14
NINLQ9Y2I6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 NME6-213ENST00000451657 871 ntTSL 2 BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
NINLQ9Y2I6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC28.4■■■□□ 2.14
NINLQ9Y2I6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NINLQ9Y2I6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
NINLQ9Y2I6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NINLQ9Y2I6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC28.4■■■□□ 2.14
NINLQ9Y2I6 RPS2P52-201ENST00000469610 820 ntBASIC28.4■■■□□ 2.14
NINLQ9Y2I6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
NINLQ9Y2I6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NINLQ9Y2I6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NINLQ9Y2I6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC28.39■■■□□ 2.13
NINLQ9Y2I6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC28.39■■■□□ 2.13
NINLQ9Y2I6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC28.39■■■□□ 2.13
NINLQ9Y2I6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
NINLQ9Y2I6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
NINLQ9Y2I6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 ADM-205ENST00000528544 586 ntTSL 2 BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 UNC93B5-201ENST00000530315 699 ntBASIC28.38■■■□□ 2.13
NINLQ9Y2I6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 AC060766.5-201ENST00000590539 871 ntBASIC28.38■■■□□ 2.13
NINLQ9Y2I6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 HLA-B-256ENST00000639848 1089 ntBASIC28.38■■■□□ 2.13
NINLQ9Y2I6 AP006294.2-201ENST00000641667 209 ntBASIC28.38■■■□□ 2.13
NINLQ9Y2I6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NINLQ9Y2I6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC28.37■■■□□ 2.13
NINLQ9Y2I6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC28.36■■■□□ 2.13
NINLQ9Y2I6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC28.36■■■□□ 2.13
NINLQ9Y2I6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NINLQ9Y2I6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
NINLQ9Y2I6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC28.36■■■□□ 2.13
NINLQ9Y2I6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
NINLQ9Y2I6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC28.36■■■□□ 2.13
NINLQ9Y2I6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms