Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC092118.2-201ENST00000613495 667 ntBASIC21.92■■□□□ 1.1
CDH9Q9ULB4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
CDH9Q9ULB4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDH9Q9ULB4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.92■■□□□ 1.1
CDH9Q9ULB4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH9Q9ULB4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH9Q9ULB4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH9Q9ULB4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 AL024507.2-201ENST00000606070 2574 ntBASIC21.91■■□□□ 1.1
CDH9Q9ULB4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 CYP2T3P-201ENST00000601990 817 ntBASIC21.91■■□□□ 1.1
CDH9Q9ULB4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH9Q9ULB4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.9■■□□□ 1.1
CDH9Q9ULB4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 AC098934.4-201ENST00000564127 592 ntBASIC21.9■■□□□ 1.1
CDH9Q9ULB4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.9■■□□□ 1.1
CDH9Q9ULB4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH9Q9ULB4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH9Q9ULB4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDH9Q9ULB4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CDH9Q9ULB4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CDH9Q9ULB4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH9Q9ULB4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 AL355472.2-201ENST00000422958 438 ntBASIC21.89■■□□□ 1.09
CDH9Q9ULB4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 AL049796.1-201ENST00000565336 1766 ntBASIC21.89■■□□□ 1.09
CDH9Q9ULB4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH9Q9ULB4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDH9Q9ULB4 CYP21A1P-202ENST00000354927 1481 ntBASIC21.88■■□□□ 1.09
CDH9Q9ULB4 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.88■■□□□ 1.09
CDH9Q9ULB4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 LSM12P1-201ENST00000411836 588 ntBASIC21.87■■□□□ 1.09
CDH9Q9ULB4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms