Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CYP21A1P-202ENST00000354927 1481 ntBASIC33.49■■■□□ 2.95
RIMBP3Q9UFD9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC33.49■■■□□ 2.95
RIMBP3Q9UFD9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
RIMBP3Q9UFD9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC33.49■■■□□ 2.95
RIMBP3Q9UFD9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
RIMBP3Q9UFD9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC33.49■■■□□ 2.95
RIMBP3Q9UFD9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
RIMBP3Q9UFD9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
RIMBP3Q9UFD9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
RIMBP3Q9UFD9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC33.48■■■□□ 2.95
RIMBP3Q9UFD9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC33.48■■■□□ 2.95
RIMBP3Q9UFD9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC33.48■■■□□ 2.95
RIMBP3Q9UFD9 AC005829.2-201ENST00000571422 1056 ntBASIC33.48■■■□□ 2.95
RIMBP3Q9UFD9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC33.48■■■□□ 2.95
RIMBP3Q9UFD9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
RIMBP3Q9UFD9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 H19-210ENST00000439725 1929 ntTSL 2 BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 AK4P3-201ENST00000418260 669 ntBASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 CLEC4GP1-201ENST00000596555 870 ntBASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
RIMBP3Q9UFD9 AC006538.3-201ENST00000612495 578 ntBASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 AC004263.2-201ENST00000617183 678 ntBASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 AP000593.1-201ENST00000393668 712 ntBASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 AC246785.2-201ENST00000432512 513 ntBASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
RIMBP3Q9UFD9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
RIMBP3Q9UFD9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
RIMBP3Q9UFD9 COPE-203ENST00000351079 907 ntTSL 2 BASIC33.45■■■□□ 2.95
RIMBP3Q9UFD9 SAPCD2P1-201ENST00000395413 1184 ntBASIC33.45■■■□□ 2.95
RIMBP3Q9UFD9 KRT16P5-201ENST00000455284 522 ntBASIC33.45■■■□□ 2.95
RIMBP3Q9UFD9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC33.45■■■□□ 2.95
RIMBP3Q9UFD9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC33.45■■■□□ 2.95
RIMBP3Q9UFD9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
RIMBP3Q9UFD9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 LINC01238-205ENST00000567549 1107 ntBASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 AP003733.4-201ENST00000623785 1697 ntBASIC33.43■■■□□ 2.94
RIMBP3Q9UFD9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 AC073195.1-201ENST00000607241 877 ntBASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 LINC01960-201ENST00000563759 1884 ntBASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 FAM8A6P-201ENST00000407496 1135 ntBASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 DBP-204ENST00000599385 709 ntTSL 3 BASIC33.42■■■□□ 2.94
RIMBP3Q9UFD9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
RIMBP3Q9UFD9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC33.41■■■□□ 2.94
RIMBP3Q9UFD9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC33.41■■■□□ 2.94
RIMBP3Q9UFD9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
RIMBP3Q9UFD9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
RIMBP3Q9UFD9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
RIMBP3Q9UFD9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
RIMBP3Q9UFD9 HCG4P8-203ENST00000443049 980 ntBASIC33.41■■■□□ 2.94
RIMBP3Q9UFD9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC33.41■■■□□ 2.94
RIMBP3Q9UFD9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC33.4■■■□□ 2.94
RIMBP3Q9UFD9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC33.4■■■□□ 2.94
RIMBP3Q9UFD9 KRT18P16-201ENST00000510337 1294 ntBASIC33.4■■■□□ 2.94
RIMBP3Q9UFD9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
RIMBP3Q9UFD9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC33.4■■■□□ 2.94
RIMBP3Q9UFD9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
RIMBP3Q9UFD9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC33.4■■■□□ 2.94
RIMBP3Q9UFD9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms