Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 AC112907.3-201ENST00000577781 2400 ntBASIC19.97■□□□□ 0.79
NDE1Q9NXR1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 AL162377.1-201ENST00000618844 1793 ntBASIC19.97■□□□□ 0.79
NDE1Q9NXR1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 AC098818.2-201ENST00000564925 2320 ntBASIC19.97■□□□□ 0.79
NDE1Q9NXR1 AP006587.3-201ENST00000525742 1516 ntBASIC19.97■□□□□ 0.79
NDE1Q9NXR1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDE1Q9NXR1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDE1Q9NXR1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDE1Q9NXR1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NDE1Q9NXR1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 AC006455.2-201ENST00000429931 906 ntBASIC19.93■□□□□ 0.78
NDE1Q9NXR1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDE1Q9NXR1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDE1Q9NXR1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms