Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 AC007322.1-201ENST00000426983 750 ntBASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.5■■□□□ 1.03
ARHGEF38Q9NXL2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 AC068338.2-201ENST00000563278 1430 ntBASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 AC026185.1-201ENST00000445748 174 ntBASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 AL162412.1-201ENST00000567129 965 ntBASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF38Q9NXL2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.48■■□□□ 1.03
ARHGEF38Q9NXL2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF38Q9NXL2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF38Q9NXL2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.48■■□□□ 1.03
ARHGEF38Q9NXL2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.48■■□□□ 1.03
ARHGEF38Q9NXL2 AL591742.1-201ENST00000604433 565 ntBASIC21.48■■□□□ 1.03
ARHGEF38Q9NXL2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF38Q9NXL2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF38Q9NXL2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.48■■□□□ 1.03
ARHGEF38Q9NXL2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.47■■□□□ 1.03
ARHGEF38Q9NXL2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 AC005229.4-201ENST00000610085 2198 ntBASIC21.46■■□□□ 1.03
ARHGEF38Q9NXL2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 CROCCP5-201ENST00000436658 830 ntBASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF38Q9NXL2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms