Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCF3Q9NUQ8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCF3Q9NUQ8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 AC105233.4-201ENST00000642045 216 ntBASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
ABCF3Q9NUQ8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCF3Q9NUQ8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCF3Q9NUQ8 AP004607.7-201ENST00000527152 1677 ntBASIC20.89■□□□□ 0.94
ABCF3Q9NUQ8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ABCF3Q9NUQ8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
ABCF3Q9NUQ8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ABCF3Q9NUQ8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
ABCF3Q9NUQ8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ABCF3Q9NUQ8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ABCF3Q9NUQ8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCF3Q9NUQ8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.89■□□□□ 0.93
ABCF3Q9NUQ8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.89■□□□□ 0.93
ABCF3Q9NUQ8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.89■□□□□ 0.93
ABCF3Q9NUQ8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCF3Q9NUQ8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ABCF3Q9NUQ8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCF3Q9NUQ8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.88■□□□□ 0.93
ABCF3Q9NUQ8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.88■□□□□ 0.93
ABCF3Q9NUQ8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCF3Q9NUQ8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ABCF3Q9NUQ8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ABCF3Q9NUQ8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCF3Q9NUQ8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCF3Q9NUQ8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCF3Q9NUQ8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.88■□□□□ 0.93
ABCF3Q9NUQ8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms