Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PFDN4Q9NQP4 TSPY26P-201ENST00000476365 1326 ntBASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN4Q9NQP4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PFDN4Q9NQP4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PFDN4Q9NQP4 AL157384.1-201ENST00000445995 2473 ntBASIC20.27■□□□□ 0.83
PFDN4Q9NQP4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PFDN4Q9NQP4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN4Q9NQP4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 RASA4CP-201ENST00000424092 1398 ntBASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 AC091305.1-201ENST00000479476 895 ntBASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 AC142381.2-201ENST00000566120 298 ntBASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 LINC01006-201ENST00000333319 2292 ntBASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 AC121338.2-201ENST00000622535 1744 ntBASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN4Q9NQP4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 MIR939-201ENST00000401314 82 ntBASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms