Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
MMP25Q9NPA2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
MMP25Q9NPA2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP25Q9NPA2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.25■□□□□ 0.67
MMP25Q9NPA2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 AC092118.2-201ENST00000613495 667 ntBASIC19.25■□□□□ 0.67
MMP25Q9NPA2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP25Q9NPA2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 AC100791.3-201ENST00000617619 330 ntBASIC19.24■□□□□ 0.67
MMP25Q9NPA2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP25Q9NPA2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 BX276092.2-201ENST00000417668 665 ntBASIC19.23■□□□□ 0.67
MMP25Q9NPA2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.23■□□□□ 0.67
MMP25Q9NPA2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP25Q9NPA2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 AC007322.3-201ENST00000426526 701 ntBASIC19.22■□□□□ 0.67
MMP25Q9NPA2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.22■□□□□ 0.67
MMP25Q9NPA2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 KRT18P6-201ENST00000555540 1265 ntBASIC19.21■□□□□ 0.67
MMP25Q9NPA2 AC098934.4-201ENST00000564127 592 ntBASIC19.21■□□□□ 0.67
MMP25Q9NPA2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP25Q9NPA2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP25Q9NPA2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms