Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 MIR6724-1-201ENST00000616420 92 ntBASIC18.72■□□□□ 0.59
HMG20AQ9NP66 MIR6724-2-201ENST00000616483 92 ntBASIC18.72■□□□□ 0.59
HMG20AQ9NP66 MIR6724-4-201ENST00000617390 92 ntBASIC18.72■□□□□ 0.59
HMG20AQ9NP66 MIR6724-3-201ENST00000622482 92 ntBASIC18.72■□□□□ 0.59
HMG20AQ9NP66 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 AC004408.2-201ENST00000623613 2777 ntBASIC18.71■□□□□ 0.59
HMG20AQ9NP66 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.71■□□□□ 0.59
HMG20AQ9NP66 AC009086.3-201ENST00000623486 1008 ntBASIC18.71■□□□□ 0.59
HMG20AQ9NP66 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20AQ9NP66 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 AL035685.1-201ENST00000636663 812 ntBASIC18.7■□□□□ 0.58
HMG20AQ9NP66 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20AQ9NP66 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20AQ9NP66 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 AC112907.3-201ENST00000577781 2400 ntBASIC18.68■□□□□ 0.58
HMG20AQ9NP66 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20AQ9NP66 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms