Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 AC010141.3-201ENST00000456659 717 ntBASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 MIR6724-1-201ENST00000616420 92 ntBASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 MIR6724-2-201ENST00000616483 92 ntBASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 MIR6724-4-201ENST00000617390 92 ntBASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 MIR6724-3-201ENST00000622482 92 ntBASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SND1-IT1Q9HBX3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 OR2I1P-207ENST00000453522 948 ntBASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 AC003102.1-202ENST00000563394 1796 ntBASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SND1-IT1Q9HBX3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 AC099791.2-201ENST00000605725 427 ntBASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SND1-IT1Q9HBX3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 PLK5-205ENST00000642079 1969 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms