Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PIF1Q9H611 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PIF1Q9H611 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.68■□□□□ 0.74
PIF1Q9H611 AC007225.1-201ENST00000566331 1836 ntBASIC19.68■□□□□ 0.74
PIF1Q9H611 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PIF1Q9H611 UNC93B3-201ENST00000308076 687 ntBASIC19.68■□□□□ 0.74
PIF1Q9H611 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.68■□□□□ 0.74
PIF1Q9H611 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.68■□□□□ 0.74
PIF1Q9H611 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PIF1Q9H611 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PIF1Q9H611 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.68■□□□□ 0.74
PIF1Q9H611 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.68■□□□□ 0.74
PIF1Q9H611 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PIF1Q9H611 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.68■□□□□ 0.74
PIF1Q9H611 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PIF1Q9H611 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PIF1Q9H611 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PIF1Q9H611 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PIF1Q9H611 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PIF1Q9H611 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PIF1Q9H611 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PIF1Q9H611 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
PIF1Q9H611 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.67■□□□□ 0.74
PIF1Q9H611 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PIF1Q9H611 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PIF1Q9H611 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PIF1Q9H611 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PIF1Q9H611 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PIF1Q9H611 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PIF1Q9H611 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PIF1Q9H611 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PIF1Q9H611 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PIF1Q9H611 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.67■□□□□ 0.74
PIF1Q9H611 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.67■□□□□ 0.74
PIF1Q9H611 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PIF1Q9H611 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.67■□□□□ 0.74
PIF1Q9H611 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.67■□□□□ 0.74
PIF1Q9H611 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PIF1Q9H611 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.67■□□□□ 0.74
PIF1Q9H611 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PIF1Q9H611 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.67■□□□□ 0.74
PIF1Q9H611 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PIF1Q9H611 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PIF1Q9H611 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PIF1Q9H611 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PIF1Q9H611 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PIF1Q9H611 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PIF1Q9H611 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PIF1Q9H611 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PIF1Q9H611 AC133561.4-201ENST00000566112 224 ntBASIC19.66■□□□□ 0.74
PIF1Q9H611 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.66■□□□□ 0.74
PIF1Q9H611 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.66■□□□□ 0.74
PIF1Q9H611 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.66■□□□□ 0.74
PIF1Q9H611 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PIF1Q9H611 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PIF1Q9H611 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PIF1Q9H611 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.66■□□□□ 0.74
PIF1Q9H611 FP700111.2-201ENST00000619190 1892 ntBASIC19.66■□□□□ 0.74
PIF1Q9H611 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PIF1Q9H611 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PIF1Q9H611 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
PIF1Q9H611 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PIF1Q9H611 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PIF1Q9H611 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 AC020907.5-201ENST00000624372 1936 ntBASIC19.65■□□□□ 0.74
PIF1Q9H611 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
PIF1Q9H611 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.65■□□□□ 0.74
PIF1Q9H611 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.65■□□□□ 0.74
PIF1Q9H611 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.65■□□□□ 0.74
PIF1Q9H611 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PIF1Q9H611 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PIF1Q9H611 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PIF1Q9H611 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.65■□□□□ 0.74
PIF1Q9H611 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.65■□□□□ 0.74
PIF1Q9H611 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PIF1Q9H611 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PIF1Q9H611 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PIF1Q9H611 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PIF1Q9H611 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PIF1Q9H611 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PIF1Q9H611 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.64■□□□□ 0.74
PIF1Q9H611 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PIF1Q9H611 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PIF1Q9H611 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PIF1Q9H611 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.64■□□□□ 0.73
PIF1Q9H611 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PIF1Q9H611 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PIF1Q9H611 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PIF1Q9H611 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.64■□□□□ 0.73
PIF1Q9H611 AL136162.1-201ENST00000607711 1078 ntBASIC19.64■□□□□ 0.73
PIF1Q9H611 AC106739.1-201ENST00000617035 715 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms