Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AP004607.4-201ENST00000530158 1459 ntBASIC22.7■■□□□ 1.22
VPS16Q9H269 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
VPS16Q9H269 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
VPS16Q9H269 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
VPS16Q9H269 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
VPS16Q9H269 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
VPS16Q9H269 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
VPS16Q9H269 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
VPS16Q9H269 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
VPS16Q9H269 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
VPS16Q9H269 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
VPS16Q9H269 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
VPS16Q9H269 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
VPS16Q9H269 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
VPS16Q9H269 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.69■■□□□ 1.22
VPS16Q9H269 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
VPS16Q9H269 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
VPS16Q9H269 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.69■■□□□ 1.22
VPS16Q9H269 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
VPS16Q9H269 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VPS16Q9H269 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
VPS16Q9H269 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VPS16Q9H269 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.68■■□□□ 1.22
VPS16Q9H269 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VPS16Q9H269 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
VPS16Q9H269 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
VPS16Q9H269 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VPS16Q9H269 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VPS16Q9H269 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.68■■□□□ 1.22
VPS16Q9H269 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VPS16Q9H269 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.68■■□□□ 1.22
VPS16Q9H269 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
VPS16Q9H269 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS16Q9H269 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS16Q9H269 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
VPS16Q9H269 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS16Q9H269 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS16Q9H269 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS16Q9H269 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS16Q9H269 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
VPS16Q9H269 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.67■■□□□ 1.22
VPS16Q9H269 MIR6084-201ENST00000622012 110 ntBASIC22.67■■□□□ 1.22
VPS16Q9H269 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS16Q9H269 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
VPS16Q9H269 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.67■■□□□ 1.22
VPS16Q9H269 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
VPS16Q9H269 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS16Q9H269 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS16Q9H269 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
VPS16Q9H269 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS16Q9H269 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS16Q9H269 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
VPS16Q9H269 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS16Q9H269 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS16Q9H269 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS16Q9H269 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS16Q9H269 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS16Q9H269 AL354811.1-201ENST00000610286 706 ntBASIC22.66■■□□□ 1.22
VPS16Q9H269 AC011484.1-201ENST00000377652 1995 ntBASIC22.66■■□□□ 1.22
VPS16Q9H269 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS16Q9H269 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS16Q9H269 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS16Q9H269 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS16Q9H269 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS16Q9H269 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS16Q9H269 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.65■■□□□ 1.22
VPS16Q9H269 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.65■■□□□ 1.22
VPS16Q9H269 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.65■■□□□ 1.22
VPS16Q9H269 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.65■■□□□ 1.22
VPS16Q9H269 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.65■■□□□ 1.22
VPS16Q9H269 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
VPS16Q9H269 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.65■■□□□ 1.22
VPS16Q9H269 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS16Q9H269 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
VPS16Q9H269 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
VPS16Q9H269 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VPS16Q9H269 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VPS16Q9H269 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
VPS16Q9H269 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS16Q9H269 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms