Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 AC121338.2-201ENST00000622535 1744 ntBASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AMBRA1Q9C0C7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 ZNRF2P3-201ENST00000424200 374 ntBASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 AC126544.1-201ENST00000580842 1059 ntBASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 MIR5787-201ENST00000611784 55 ntBASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 AC009237.3-201ENST00000393279 1427 ntBASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 AC112907.3-201ENST00000577781 2400 ntBASIC19.3■□□□□ 0.68
AMBRA1Q9C0C7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 IGHV3-19-201ENST00000521488 291 ntBASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 AC020907.5-201ENST00000624372 1936 ntBASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.29■□□□□ 0.68
AMBRA1Q9C0C7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AMBRA1Q9C0C7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 AC087289.5-201ENST00000586076 3175 ntBASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.27■□□□□ 0.68
AMBRA1Q9C0C7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
AMBRA1Q9C0C7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
AMBRA1Q9C0C7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AMBRA1Q9C0C7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
AMBRA1Q9C0C7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
AMBRA1Q9C0C7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AMBRA1Q9C0C7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AMBRA1Q9C0C7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms