Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPPED1Q9BRF8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 AC112907.3-201ENST00000577781 2400 ntBASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CPPED1Q9BRF8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 AC096631.2-201ENST00000436136 790 ntBASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 PBX2P1-201ENST00000493219 1291 ntBASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPPED1Q9BRF8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 AC007952.6-201ENST00000573168 2673 ntBASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 AC003957.1-201ENST00000625108 2673 ntBASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 AC012414.1-201ENST00000556676 535 ntBASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 TPRG1LP1-201ENST00000598702 760 ntBASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 AC106739.1-201ENST00000617035 715 ntBASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPPED1Q9BRF8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms