Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF2Q99496 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
RNF2Q99496 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF2Q99496 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF2Q99496 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF2Q99496 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.38■□□□□ 0.21
RNF2Q99496 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.38■□□□□ 0.21
RNF2Q99496 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF2Q99496 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RNF2Q99496 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RNF2Q99496 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RNF2Q99496 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF2Q99496 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF2Q99496 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF2Q99496 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF2Q99496 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF2Q99496 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNF2Q99496 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
RNF2Q99496 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF2Q99496 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RNF2Q99496 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RNF2Q99496 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF2Q99496 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNF2Q99496 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNF2Q99496 AC003102.1-202ENST00000563394 1796 ntBASIC16.37■□□□□ 0.21
RNF2Q99496 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF2Q99496 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF2Q99496 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF2Q99496 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF2Q99496 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF2Q99496 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF2Q99496 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF2Q99496 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF2Q99496 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF2Q99496 AP004607.7-201ENST00000527152 1677 ntBASIC16.37■□□□□ 0.21
RNF2Q99496 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF2Q99496 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RNF2Q99496 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF2Q99496 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF2Q99496 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF2Q99496 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF2Q99496 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF2Q99496 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RNF2Q99496 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 AP005212.1-201ENST00000581547 1997 ntBASIC16.36■□□□□ 0.21
RNF2Q99496 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF2Q99496 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF2Q99496 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF2Q99496 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF2Q99496 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RNF2Q99496 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF2Q99496 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF2Q99496 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
RNF2Q99496 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RNF2Q99496 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF2Q99496 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF2Q99496 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF2Q99496 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.35■□□□□ 0.21
RNF2Q99496 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF2Q99496 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF2Q99496 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
RNF2Q99496 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF2Q99496 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RNF2Q99496 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF2Q99496 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms