Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 AC245052.3-201ENST00000450182 901 ntBASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 KRT18P20-201ENST00000548986 1279 ntBASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHB18PQ96TA0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 AC097381.1-201ENST00000429019 1296 ntBASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 AC087623.3-201ENST00000607047 1098 ntBASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHB18PQ96TA0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB18PQ96TA0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 MIR6821-201ENST00000617625 74 ntBASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 AL121603.2-201ENST00000557373 2117 ntBASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHB18PQ96TA0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 AC019069.1-201ENST00000610008 1333 ntBASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 NTF6G-201ENST00000591094 616 ntBASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB18PQ96TA0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms