Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.07■□□□□ 0.16
DUX3Q96PT4 EP400NL-214ENST00000641289 2402 ntBASIC16.07■□□□□ 0.16
DUX3Q96PT4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX3Q96PT4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 MIPEPP3-201ENST00000412105 444 ntBASIC16.06■□□□□ 0.16
DUX3Q96PT4 BX276092.2-201ENST00000417668 665 ntBASIC16.06■□□□□ 0.16
DUX3Q96PT4 AC069152.1-201ENST00000438030 544 ntBASIC16.06■□□□□ 0.16
DUX3Q96PT4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
DUX3Q96PT4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 OR10C1-204ENST00000622521 1039 ntBASIC16.06■□□□□ 0.16
DUX3Q96PT4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX3Q96PT4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DUX3Q96PT4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUX3Q96PT4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUX3Q96PT4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUX3Q96PT4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 AC245052.3-201ENST00000450182 901 ntBASIC16.05■□□□□ 0.16
DUX3Q96PT4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
DUX3Q96PT4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUX3Q96PT4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUX3Q96PT4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUX3Q96PT4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
DUX3Q96PT4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.04■□□□□ 0.16
DUX3Q96PT4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 KRT18P6-201ENST00000555540 1265 ntBASIC16.04■□□□□ 0.16
DUX3Q96PT4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
DUX3Q96PT4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 ECEL1P1-201ENST00000373592 1742 ntBASIC16.04■□□□□ 0.16
DUX3Q96PT4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.04■□□□□ 0.16
DUX3Q96PT4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUX3Q96PT4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 AIRN-201ENST00000601203 4374 ntBASIC16.03■□□□□ 0.16
DUX3Q96PT4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.03■□□□□ 0.16
DUX3Q96PT4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
DUX3Q96PT4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.03■□□□□ 0.16
DUX3Q96PT4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 ABHD17AP1-201ENST00000358206 933 ntBASIC16.03■□□□□ 0.16
DUX3Q96PT4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 TSPY20P-201ENST00000450910 630 ntBASIC16.03■□□□□ 0.16
DUX3Q96PT4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.03■□□□□ 0.16
DUX3Q96PT4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.03■□□□□ 0.16
DUX3Q96PT4 AC133041.1-202ENST00000642053 222 ntBASIC16.03■□□□□ 0.16
DUX3Q96PT4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
DUX3Q96PT4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DUX3Q96PT4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DUX3Q96PT4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX3Q96PT4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.03■□□□□ 0.16
DUX3Q96PT4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX3Q96PT4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX3Q96PT4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
DUX3Q96PT4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX3Q96PT4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX3Q96PT4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms