Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 AC233723.2-201ENST00000623798 2106 ntBASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC74BQ96LY2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 UNC93B4-201ENST00000505679 747 ntBASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC74BQ96LY2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC74BQ96LY2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 SOX15-203ENST00000570788 1093 ntBASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC74BQ96LY2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC74BQ96LY2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC74BQ96LY2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC74BQ96LY2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC74BQ96LY2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC74BQ96LY2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC74BQ96LY2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC74BQ96LY2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC74BQ96LY2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC74BQ96LY2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms