Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CALR3Q96L12 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CALR3Q96L12 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 TPRG1LP1-201ENST00000598702 760 ntBASIC21.84■■□□□ 1.09
CALR3Q96L12 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.84■■□□□ 1.09
CALR3Q96L12 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CALR3Q96L12 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
CALR3Q96L12 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CALR3Q96L12 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CALR3Q96L12 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
CALR3Q96L12 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CALR3Q96L12 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.83■■□□□ 1.09
CALR3Q96L12 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CALR3Q96L12 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CALR3Q96L12 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CALR3Q96L12 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CALR3Q96L12 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CALR3Q96L12 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.08
CALR3Q96L12 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CALR3Q96L12 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CALR3Q96L12 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CALR3Q96L12 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CALR3Q96L12 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CALR3Q96L12 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
CALR3Q96L12 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CALR3Q96L12 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CALR3Q96L12 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CALR3Q96L12 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.82■■□□□ 1.08
CALR3Q96L12 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.82■■□□□ 1.08
CALR3Q96L12 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.82■■□□□ 1.08
CALR3Q96L12 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
CALR3Q96L12 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.82■■□□□ 1.08
CALR3Q96L12 AL358852.1-201ENST00000623174 1268 ntBASIC21.82■■□□□ 1.08
CALR3Q96L12 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.82■■□□□ 1.08
CALR3Q96L12 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CALR3Q96L12 AC061975.6-201ENST00000579045 1553 ntBASIC21.82■■□□□ 1.08
CALR3Q96L12 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CALR3Q96L12 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CALR3Q96L12 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CALR3Q96L12 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CALR3Q96L12 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CALR3Q96L12 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.81■■□□□ 1.08
CALR3Q96L12 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.81■■□□□ 1.08
CALR3Q96L12 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.81■■□□□ 1.08
CALR3Q96L12 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 AL136967.2-201ENST00000623968 743 ntBASIC21.81■■□□□ 1.08
CALR3Q96L12 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CALR3Q96L12 AL162377.1-201ENST00000618844 1793 ntBASIC21.81■■□□□ 1.08
CALR3Q96L12 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALR3Q96L12 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.8■■□□□ 1.08
CALR3Q96L12 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CALR3Q96L12 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.8■■□□□ 1.08
CALR3Q96L12 AF213884.3-201ENST00000563833 479 ntBASIC21.8■■□□□ 1.08
CALR3Q96L12 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.8■■□□□ 1.08
CALR3Q96L12 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CALR3Q96L12 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 KRT16P2-201ENST00000414673 1423 ntBASIC21.8■■□□□ 1.08
CALR3Q96L12 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALR3Q96L12 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CALR3Q96L12 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CALR3Q96L12 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALR3Q96L12 FP700111.2-201ENST00000619190 1892 ntBASIC21.79■■□□□ 1.08
CALR3Q96L12 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALR3Q96L12 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CALR3Q96L12 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CALR3Q96L12 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALR3Q96L12 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CALR3Q96L12 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms