Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 MTDHP2-201ENST00000601468 714 ntBASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1LQ96KA5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLPTM1LQ96KA5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLPTM1LQ96KA5 AP006587.3-201ENST00000525742 1516 ntBASIC19.83■□□□□ 0.77
CLPTM1LQ96KA5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLPTM1LQ96KA5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CLPTM1LQ96KA5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPTM1LQ96KA5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.83■□□□□ 0.77
CLPTM1LQ96KA5 AC012354.3-201ENST00000623734 483 ntBASIC19.83■□□□□ 0.77
CLPTM1LQ96KA5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
CLPTM1LQ96KA5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 AC241377.3-202ENST00000626088 1088 ntBASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 AC241585.3-202ENST00000628937 1088 ntBASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 AC245100.8-202ENST00000629247 1058 ntBASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLPTM1LQ96KA5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1LQ96KA5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 AL117332.1-201ENST00000622628 974 ntBASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 TNXA-203ENST00000507684 2038 ntBASIC19.8■□□□□ 0.76
CLPTM1LQ96KA5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1LQ96KA5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1LQ96KA5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1LQ96KA5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPTM1LQ96KA5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPTM1LQ96KA5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPTM1LQ96KA5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms