Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ITCHQ96J02 AC096631.2-201ENST00000436136 790 ntBASIC19.65■□□□□ 0.74
ITCHQ96J02 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.65■□□□□ 0.74
ITCHQ96J02 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.65■□□□□ 0.74
ITCHQ96J02 EEF1DP3-203ENST00000566025 782 ntBASIC19.65■□□□□ 0.74
ITCHQ96J02 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
ITCHQ96J02 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ITCHQ96J02 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.65■□□□□ 0.74
ITCHQ96J02 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ITCHQ96J02 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.65■□□□□ 0.74
ITCHQ96J02 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ITCHQ96J02 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ITCHQ96J02 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ITCHQ96J02 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.65■□□□□ 0.74
ITCHQ96J02 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ITCHQ96J02 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.65■□□□□ 0.74
ITCHQ96J02 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ITCHQ96J02 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ITCHQ96J02 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.64■□□□□ 0.74
ITCHQ96J02 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
ITCHQ96J02 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
ITCHQ96J02 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ITCHQ96J02 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ITCHQ96J02 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.64■□□□□ 0.73
ITCHQ96J02 EDA-201ENST00000338901 1233 ntBASIC19.64■□□□□ 0.73
ITCHQ96J02 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ITCHQ96J02 AP001330.3-201ENST00000520123 633 ntBASIC19.64■□□□□ 0.73
ITCHQ96J02 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.64■□□□□ 0.73
ITCHQ96J02 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.64■□□□□ 0.73
ITCHQ96J02 AC106739.1-201ENST00000617035 715 ntBASIC19.64■□□□□ 0.73
ITCHQ96J02 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ITCHQ96J02 AC008406.3-201ENST00000620001 1374 ntBASIC19.64■□□□□ 0.73
ITCHQ96J02 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ITCHQ96J02 AP004607.4-201ENST00000530158 1459 ntBASIC19.64■□□□□ 0.73
ITCHQ96J02 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ITCHQ96J02 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ITCHQ96J02 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ITCHQ96J02 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ITCHQ96J02 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ITCHQ96J02 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ITCHQ96J02 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ITCHQ96J02 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ITCHQ96J02 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.64■□□□□ 0.73
ITCHQ96J02 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ITCHQ96J02 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
ITCHQ96J02 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 FP700111.2-201ENST00000619190 1892 ntBASIC19.63■□□□□ 0.73
ITCHQ96J02 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.63■□□□□ 0.73
ITCHQ96J02 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.63■□□□□ 0.73
ITCHQ96J02 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.63■□□□□ 0.73
ITCHQ96J02 RASA4CP-201ENST00000424092 1398 ntBASIC19.63■□□□□ 0.73
ITCHQ96J02 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.63■□□□□ 0.73
ITCHQ96J02 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
ITCHQ96J02 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 AC011484.1-201ENST00000377652 1995 ntBASIC19.63■□□□□ 0.73
ITCHQ96J02 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ITCHQ96J02 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ITCHQ96J02 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.62■□□□□ 0.73
ITCHQ96J02 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
ITCHQ96J02 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.62■□□□□ 0.73
ITCHQ96J02 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.62■□□□□ 0.73
ITCHQ96J02 AL355001.2-201ENST00000620617 1191 ntBASIC19.62■□□□□ 0.73
ITCHQ96J02 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ITCHQ96J02 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITCHQ96J02 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ITCHQ96J02 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ITCHQ96J02 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.61■□□□□ 0.73
ITCHQ96J02 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ITCHQ96J02 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ITCHQ96J02 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.61■□□□□ 0.73
ITCHQ96J02 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ITCHQ96J02 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.61■□□□□ 0.73
ITCHQ96J02 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITCHQ96J02 AC061975.6-201ENST00000579045 1553 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms