Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 PKD1P6-201ENST00000343738 4769 ntBASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 AC091799.1-201ENST00000422823 811 ntBASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 LINC01006-201ENST00000333319 2292 ntBASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 AC073314.1-201ENST00000568729 2216 ntBASIC20.21■□□□□ 0.83
PDLIM5Q96HC4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 FP700111.2-201ENST00000619190 1892 ntBASIC20.2■□□□□ 0.82
PDLIM5Q96HC4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 AC087623.3-201ENST00000607047 1098 ntBASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM5Q96HC4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 UBE2DNL-204ENST00000602536 740 ntBASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms