Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IFT43Q96FT9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
IFT43Q96FT9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IFT43Q96FT9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
IFT43Q96FT9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
IFT43Q96FT9 HLA-L-209ENST00000420110 1011 ntBASIC21.25■□□□□ 0.99
IFT43Q96FT9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IFT43Q96FT9 AC104187.1-201ENST00000607510 612 ntBASIC21.25■□□□□ 0.99
IFT43Q96FT9 AC008175.2-201ENST00000612840 297 ntBASIC21.25■□□□□ 0.99
IFT43Q96FT9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IFT43Q96FT9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IFT43Q96FT9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
IFT43Q96FT9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.24■□□□□ 0.99
IFT43Q96FT9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
IFT43Q96FT9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
IFT43Q96FT9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IFT43Q96FT9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
IFT43Q96FT9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
IFT43Q96FT9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
IFT43Q96FT9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
IFT43Q96FT9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.24■□□□□ 0.99
IFT43Q96FT9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IFT43Q96FT9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.24■□□□□ 0.99
IFT43Q96FT9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IFT43Q96FT9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IFT43Q96FT9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
IFT43Q96FT9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IFT43Q96FT9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 AC138907.5-202ENST00000569484 235 ntBASIC21.23■□□□□ 0.99
IFT43Q96FT9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 AC011767.1-201ENST00000617410 1153 ntBASIC21.23■□□□□ 0.99
IFT43Q96FT9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IFT43Q96FT9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IFT43Q96FT9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IFT43Q96FT9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
IFT43Q96FT9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IFT43Q96FT9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.22■□□□□ 0.99
IFT43Q96FT9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.22■□□□□ 0.99
IFT43Q96FT9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
IFT43Q96FT9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IFT43Q96FT9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IFT43Q96FT9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.22■□□□□ 0.99
IFT43Q96FT9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.22■□□□□ 0.99
IFT43Q96FT9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
IFT43Q96FT9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.22■□□□□ 0.99
IFT43Q96FT9 AL391422.3-201ENST00000603791 2761 ntBASIC21.22■□□□□ 0.99
IFT43Q96FT9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IFT43Q96FT9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IFT43Q96FT9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IFT43Q96FT9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
IFT43Q96FT9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IFT43Q96FT9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
IFT43Q96FT9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IFT43Q96FT9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IFT43Q96FT9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
IFT43Q96FT9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IFT43Q96FT9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IFT43Q96FT9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.21■□□□□ 0.99
IFT43Q96FT9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IFT43Q96FT9 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.21■□□□□ 0.99
IFT43Q96FT9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IFT43Q96FT9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
IFT43Q96FT9 FEM1AP4-201ENST00000443167 1987 ntBASIC21.21■□□□□ 0.99
IFT43Q96FT9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IFT43Q96FT9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
IFT43Q96FT9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 POU5F1P4-201ENST00000413175 1085 ntBASIC21.2■□□□□ 0.98
IFT43Q96FT9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
IFT43Q96FT9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IFT43Q96FT9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IFT43Q96FT9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
IFT43Q96FT9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IFT43Q96FT9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.19■□□□□ 0.98
IFT43Q96FT9 AC061975.6-201ENST00000579045 1553 ntBASIC21.19■□□□□ 0.98
IFT43Q96FT9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IFT43Q96FT9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IFT43Q96FT9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IFT43Q96FT9 AC010141.2-201ENST00000452426 721 ntBASIC21.19■□□□□ 0.98
IFT43Q96FT9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.19■□□□□ 0.98
IFT43Q96FT9 AP001160.3-201ENST00000601484 763 ntBASIC21.19■□□□□ 0.98
IFT43Q96FT9 AC120498.10-201ENST00000621827 505 ntBASIC21.19■□□□□ 0.98
IFT43Q96FT9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IFT43Q96FT9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IFT43Q96FT9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IFT43Q96FT9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms