Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 AC011484.1-201ENST00000377652 1995 ntBASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
ECHDC3Q96DC8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 AC142086.2-201ENST00000569753 217 ntBASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ECHDC3Q96DC8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 MKRN4P-201ENST00000444706 1521 ntBASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 AF106564.1-201ENST00000607058 2553 ntBASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ECHDC3Q96DC8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC3Q96DC8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 SLC29A4P1-201ENST00000398760 971 ntBASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC3Q96DC8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 MIPEPP3-201ENST00000412105 444 ntBASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.7■□□□□ 0.9
ECHDC3Q96DC8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC3Q96DC8 CYP21A1P-202ENST00000354927 1481 ntBASIC20.69■□□□□ 0.9
ECHDC3Q96DC8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC3Q96DC8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ECHDC3Q96DC8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC3Q96DC8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC3Q96DC8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC3Q96DC8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms