Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 OR10C1-204ENST00000622521 1039 ntBASIC20.58■□□□□ 0.89
SCAMP4Q969E2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
SCAMP4Q969E2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SCAMP4Q969E2 AC116050.2-201ENST00000612102 1779 ntBASIC20.57■□□□□ 0.88
SCAMP4Q969E2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCAMP4Q969E2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCAMP4Q969E2 GUSBP6-202ENST00000438529 1198 ntBASIC20.57■□□□□ 0.88
SCAMP4Q969E2 TSPY6P-201ENST00000448518 926 ntBASIC20.57■□□□□ 0.88
SCAMP4Q969E2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.57■□□□□ 0.88
SCAMP4Q969E2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SCAMP4Q969E2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.57■□□□□ 0.88
SCAMP4Q969E2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.57■□□□□ 0.88
SCAMP4Q969E2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SCAMP4Q969E2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 AC007322.3-201ENST00000426526 701 ntBASIC20.56■□□□□ 0.88
SCAMP4Q969E2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 AC005229.4-201ENST00000610085 2198 ntBASIC20.56■□□□□ 0.88
SCAMP4Q969E2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.56■□□□□ 0.88
SCAMP4Q969E2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 FAM21FP-204ENST00000608637 956 ntBASIC20.55■□□□□ 0.88
SCAMP4Q969E2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCAMP4Q969E2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
SCAMP4Q969E2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCAMP4Q969E2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SCAMP4Q969E2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCAMP4Q969E2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCAMP4Q969E2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.54■□□□□ 0.88
SCAMP4Q969E2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SCAMP4Q969E2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCAMP4Q969E2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCAMP4Q969E2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 AL512625.2-201ENST00000417533 625 ntBASIC20.53■□□□□ 0.88
SCAMP4Q969E2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 MKRN4P-201ENST00000444706 1521 ntBASIC20.53■□□□□ 0.88
SCAMP4Q969E2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCAMP4Q969E2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.52■□□□□ 0.88
SCAMP4Q969E2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCAMP4Q969E2 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.52■□□□□ 0.88
SCAMP4Q969E2 AL355802.2-201ENST00000402069 882 ntBASIC20.52■□□□□ 0.88
SCAMP4Q969E2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.52■□□□□ 0.88
SCAMP4Q969E2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCAMP4Q969E2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCAMP4Q969E2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCAMP4Q969E2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
SCAMP4Q969E2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCAMP4Q969E2 AC010980.2-201ENST00000587099 1412 ntBASIC20.52■□□□□ 0.87
SCAMP4Q969E2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SCAMP4Q969E2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.52■□□□□ 0.87
SCAMP4Q969E2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCAMP4Q969E2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SCAMP4Q969E2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCAMP4Q969E2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SCAMP4Q969E2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms