Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS1Q92902 AC087742.1-201ENST00000575880 1738 ntBASIC18.74■□□□□ 0.59
HPS1Q92902 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS1Q92902 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
HPS1Q92902 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS1Q92902 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS1Q92902 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS1Q92902 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.74■□□□□ 0.59
HPS1Q92902 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.74■□□□□ 0.59
HPS1Q92902 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS1Q92902 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HPS1Q92902 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HPS1Q92902 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.74■□□□□ 0.59
HPS1Q92902 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.74■□□□□ 0.59
HPS1Q92902 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
HPS1Q92902 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS1Q92902 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS1Q92902 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.74■□□□□ 0.59
HPS1Q92902 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS1Q92902 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.73■□□□□ 0.59
HPS1Q92902 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HPS1Q92902 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HPS1Q92902 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS1Q92902 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.73■□□□□ 0.59
HPS1Q92902 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS1Q92902 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS1Q92902 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS1Q92902 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HPS1Q92902 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.73■□□□□ 0.59
HPS1Q92902 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
HPS1Q92902 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS1Q92902 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS1Q92902 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.72■□□□□ 0.59
HPS1Q92902 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS1Q92902 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS1Q92902 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS1Q92902 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HPS1Q92902 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.72■□□□□ 0.59
HPS1Q92902 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.72■□□□□ 0.59
HPS1Q92902 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.72■□□□□ 0.59
HPS1Q92902 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS1Q92902 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
HPS1Q92902 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.72■□□□□ 0.59
HPS1Q92902 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.72■□□□□ 0.59
HPS1Q92902 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS1Q92902 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS1Q92902 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS1Q92902 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HPS1Q92902 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS1Q92902 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS1Q92902 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS1Q92902 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HPS1Q92902 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HPS1Q92902 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS1Q92902 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS1Q92902 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HPS1Q92902 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.71■□□□□ 0.59
HPS1Q92902 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.71■□□□□ 0.59
HPS1Q92902 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.71■□□□□ 0.59
HPS1Q92902 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.71■□□□□ 0.59
HPS1Q92902 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.71■□□□□ 0.59
HPS1Q92902 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.71■□□□□ 0.59
HPS1Q92902 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.71■□□□□ 0.59
HPS1Q92902 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.71■□□□□ 0.59
HPS1Q92902 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HPS1Q92902 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HPS1Q92902 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.71■□□□□ 0.59
HPS1Q92902 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
HPS1Q92902 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms