Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 AC027702.1-201ENST00000563810 1770 ntBASIC16.28■□□□□ 0.2
NPIPB3Q92617 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPB3Q92617 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB3Q92617 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NPIPB3Q92617 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB3Q92617 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
NPIPB3Q92617 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NPIPB3Q92617 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB3Q92617 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB3Q92617 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB3Q92617 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB3Q92617 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB3Q92617 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB3Q92617 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPIPB3Q92617 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.27■□□□□ 0.2
NPIPB3Q92617 MIR572-201ENST00000384983 95 ntBASIC16.27■□□□□ 0.2
NPIPB3Q92617 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.27■□□□□ 0.2
NPIPB3Q92617 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.27■□□□□ 0.2
NPIPB3Q92617 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.27■□□□□ 0.2
NPIPB3Q92617 AC106739.1-201ENST00000617035 715 ntBASIC16.27■□□□□ 0.2
NPIPB3Q92617 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPIPB3Q92617 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB3Q92617 AL391422.3-201ENST00000603791 2761 ntBASIC16.27■□□□□ 0.2
NPIPB3Q92617 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.27■□□□□ 0.19
NPIPB3Q92617 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.27■□□□□ 0.19
NPIPB3Q92617 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
NPIPB3Q92617 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.27■□□□□ 0.19
NPIPB3Q92617 AIRN-201ENST00000601203 4374 ntBASIC16.27■□□□□ 0.19
NPIPB3Q92617 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
NPIPB3Q92617 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NPIPB3Q92617 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.27■□□□□ 0.19
NPIPB3Q92617 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB3Q92617 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB3Q92617 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 PCDHAC2-203ENST00000615316 3011 ntBASIC16.26■□□□□ 0.19
NPIPB3Q92617 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB3Q92617 EDA-201ENST00000338901 1233 ntBASIC16.26■□□□□ 0.19
NPIPB3Q92617 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 AP001330.3-201ENST00000520123 633 ntBASIC16.26■□□□□ 0.19
NPIPB3Q92617 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 FP700111.2-201ENST00000619190 1892 ntBASIC16.26■□□□□ 0.19
NPIPB3Q92617 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.26■□□□□ 0.19
NPIPB3Q92617 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB3Q92617 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB3Q92617 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB3Q92617 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB3Q92617 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB3Q92617 AC020907.5-201ENST00000624372 1936 ntBASIC16.25■□□□□ 0.19
NPIPB3Q92617 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms