Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.38■□□□□ 0.53
GCN1Q92616 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.38■□□□□ 0.53
GCN1Q92616 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GCN1Q92616 AL022342.1-201ENST00000400363 863 ntBASIC18.38■□□□□ 0.53
GCN1Q92616 AC128688.1-201ENST00000487626 519 ntBASIC18.38■□□□□ 0.53
GCN1Q92616 SLC25A1P4-201ENST00000567977 778 ntBASIC18.38■□□□□ 0.53
GCN1Q92616 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GCN1Q92616 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.37■□□□□ 0.53
GCN1Q92616 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.37■□□□□ 0.53
GCN1Q92616 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.37■□□□□ 0.53
GCN1Q92616 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.37■□□□□ 0.53
GCN1Q92616 AC079630.1-202ENST00000618127 1840 ntBASIC18.37■□□□□ 0.53
GCN1Q92616 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.37■□□□□ 0.53
GCN1Q92616 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.37■□□□□ 0.53
GCN1Q92616 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
GCN1Q92616 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GCN1Q92616 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GCN1Q92616 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.37■□□□□ 0.53
GCN1Q92616 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GCN1Q92616 AL671277.2-201ENST00000458060 996 ntBASIC18.36■□□□□ 0.53
GCN1Q92616 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.36■□□□□ 0.53
GCN1Q92616 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.36■□□□□ 0.53
GCN1Q92616 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GCN1Q92616 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GCN1Q92616 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GCN1Q92616 RNF152P1-201ENST00000397754 604 ntBASIC18.36■□□□□ 0.53
GCN1Q92616 PCED1CP-201ENST00000419887 785 ntBASIC18.36■□□□□ 0.53
GCN1Q92616 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.36■□□□□ 0.53
GCN1Q92616 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.36■□□□□ 0.53
GCN1Q92616 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.36■□□□□ 0.53
GCN1Q92616 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GCN1Q92616 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.36■□□□□ 0.53
GCN1Q92616 AL353803.4-201ENST00000565882 1934 ntBASIC18.36■□□□□ 0.53
GCN1Q92616 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GCN1Q92616 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GCN1Q92616 AC092183.1-201ENST00000469884 875 ntBASIC18.36■□□□□ 0.53
GCN1Q92616 AC139887.4-201ENST00000607877 719 ntBASIC18.36■□□□□ 0.53
GCN1Q92616 AC069148.1-201ENST00000608741 768 ntBASIC18.36■□□□□ 0.53
GCN1Q92616 AC008622.2-201ENST00000617006 1229 ntBASIC18.36■□□□□ 0.53
GCN1Q92616 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GCN1Q92616 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GCN1Q92616 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.35■□□□□ 0.53
GCN1Q92616 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.35■□□□□ 0.53
GCN1Q92616 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GCN1Q92616 AC092647.4-201ENST00000457211 535 ntBASIC18.35■□□□□ 0.53
GCN1Q92616 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.35■□□□□ 0.53
GCN1Q92616 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
GCN1Q92616 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.35■□□□□ 0.53
GCN1Q92616 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.35■□□□□ 0.53
GCN1Q92616 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GCN1Q92616 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GCN1Q92616 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.35■□□□□ 0.53
GCN1Q92616 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCN1Q92616 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCN1Q92616 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GCN1Q92616 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GCN1Q92616 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GCN1Q92616 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GCN1Q92616 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCN1Q92616 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCN1Q92616 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCN1Q92616 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCN1Q92616 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCN1Q92616 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.34■□□□□ 0.53
GCN1Q92616 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.34■□□□□ 0.53
GCN1Q92616 AC005829.2-201ENST00000571422 1056 ntBASIC18.34■□□□□ 0.53
GCN1Q92616 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCN1Q92616 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GCN1Q92616 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GCN1Q92616 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCN1Q92616 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.34■□□□□ 0.53
GCN1Q92616 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.34■□□□□ 0.53
GCN1Q92616 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.34■□□□□ 0.53
GCN1Q92616 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCN1Q92616 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCN1Q92616 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GCN1Q92616 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCN1Q92616 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCN1Q92616 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCN1Q92616 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCN1Q92616 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCN1Q92616 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
GCN1Q92616 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.33■□□□□ 0.52
GCN1Q92616 YBX1P2-201ENST00000489612 999 ntBASIC18.33■□□□□ 0.52
GCN1Q92616 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCN1Q92616 FAM86EP-206ENST00000510506 987 ntBASIC18.33■□□□□ 0.52
GCN1Q92616 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCN1Q92616 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GCN1Q92616 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GCN1Q92616 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCN1Q92616 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms