Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC32.41■■■□□ 2.78
CASKIN1Q8WXD9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 SOX15-203ENST00000570788 1093 ntBASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC32.4■■■□□ 2.78
CASKIN1Q8WXD9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 AL158047.1-201ENST00000445918 881 ntBASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 HES2-205ENST00000487437 968 ntTSL 3 BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 AC069544.1-201ENST00000609399 999 ntBASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 AL359736.2-201ENST00000621992 437 ntBASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CASKIN1Q8WXD9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC32.39■■■□□ 2.77
CASKIN1Q8WXD9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CASKIN1Q8WXD9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CASKIN1Q8WXD9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CASKIN1Q8WXD9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC32.35■■■□□ 2.77
CASKIN1Q8WXD9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC32.35■■■□□ 2.77
CASKIN1Q8WXD9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC32.35■■■□□ 2.77
CASKIN1Q8WXD9 USP36-216ENST00000589424 970 ntTSL 5 BASIC32.35■■■□□ 2.77
CASKIN1Q8WXD9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
CASKIN1Q8WXD9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CASKIN1Q8WXD9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CASKIN1Q8WXD9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC32.35■■■□□ 2.77
CASKIN1Q8WXD9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC32.34■■■□□ 2.77
CASKIN1Q8WXD9 OR2A1-AS1-207ENST00000486094 819 ntBASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms