Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 AC125437.2-201ENST00000625180 2167 ntBASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 AC010141.3-201ENST00000456659 717 ntBASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD3L1Q8WWY6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD3L1Q8WWY6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MBD3L1Q8WWY6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MBD3L1Q8WWY6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
MBD3L1Q8WWY6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 AL158211.5-201ENST00000623583 2518 ntBASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MBD3L1Q8WWY6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 MIR4508-201ENST00000584178 70 ntBASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.19■□□□□ 0.18
MBD3L1Q8WWY6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MBD3L1Q8WWY6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MBD3L1Q8WWY6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD3L1Q8WWY6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms