Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 AC073648.6-201ENST00000641589 218 ntBASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEM40Q8WWA1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 AC105020.6-201ENST00000621523 1217 ntBASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM40Q8WWA1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM40Q8WWA1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.58■■□□□ 1.21
TMEM40Q8WWA1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.58■■□□□ 1.21
TMEM40Q8WWA1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM40Q8WWA1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM40Q8WWA1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM40Q8WWA1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.58■■□□□ 1.21
TMEM40Q8WWA1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM40Q8WWA1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TMEM40Q8WWA1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.58■■□□□ 1.2
TMEM40Q8WWA1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.58■■□□□ 1.2
TMEM40Q8WWA1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.58■■□□□ 1.2
TMEM40Q8WWA1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TMEM40Q8WWA1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 PNMA6B-201ENST00000538162 1200 ntBASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
TMEM40Q8WWA1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 AC133561.1-201ENST00000568600 2415 ntBASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
TMEM40Q8WWA1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 AL158047.1-201ENST00000445918 881 ntBASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms