Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RDH11Q8TC12 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RDH11Q8TC12 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RDH11Q8TC12 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RDH11Q8TC12 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RDH11Q8TC12 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.33■□□□□ 0.85
RDH11Q8TC12 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 AL512408.1-201ENST00000569378 2000 ntBASIC20.33■□□□□ 0.85
RDH11Q8TC12 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RDH11Q8TC12 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH11Q8TC12 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RDH11Q8TC12 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RDH11Q8TC12 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH11Q8TC12 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.32■□□□□ 0.84
RDH11Q8TC12 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH11Q8TC12 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.32■□□□□ 0.84
RDH11Q8TC12 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RDH11Q8TC12 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RDH11Q8TC12 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RDH11Q8TC12 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.32■□□□□ 0.84
RDH11Q8TC12 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.32■□□□□ 0.84
RDH11Q8TC12 AC061975.6-201ENST00000579045 1553 ntBASIC20.32■□□□□ 0.84
RDH11Q8TC12 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH11Q8TC12 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RDH11Q8TC12 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.32■□□□□ 0.84
RDH11Q8TC12 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH11Q8TC12 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.32■□□□□ 0.84
RDH11Q8TC12 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH11Q8TC12 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH11Q8TC12 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH11Q8TC12 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH11Q8TC12 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH11Q8TC12 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH11Q8TC12 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RDH11Q8TC12 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH11Q8TC12 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH11Q8TC12 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RDH11Q8TC12 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RDH11Q8TC12 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RDH11Q8TC12 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RDH11Q8TC12 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH11Q8TC12 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 MIR638-201ENST00000385237 100 ntBASIC20.3■□□□□ 0.84
RDH11Q8TC12 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RDH11Q8TC12 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH11Q8TC12 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.3■□□□□ 0.84
RDH11Q8TC12 AC106739.1-201ENST00000617035 715 ntBASIC20.3■□□□□ 0.84
RDH11Q8TC12 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.3■□□□□ 0.84
RDH11Q8TC12 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH11Q8TC12 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RDH11Q8TC12 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH11Q8TC12 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH11Q8TC12 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH11Q8TC12 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RDH11Q8TC12 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH11Q8TC12 EDA-201ENST00000338901 1233 ntBASIC20.29■□□□□ 0.84
RDH11Q8TC12 POU5F1P4-201ENST00000413175 1085 ntBASIC20.29■□□□□ 0.84
RDH11Q8TC12 AP001330.3-201ENST00000520123 633 ntBASIC20.29■□□□□ 0.84
RDH11Q8TC12 AC012414.1-201ENST00000556676 535 ntBASIC20.29■□□□□ 0.84
RDH11Q8TC12 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.29■□□□□ 0.84
RDH11Q8TC12 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH11Q8TC12 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RDH11Q8TC12 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH11Q8TC12 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH11Q8TC12 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RDH11Q8TC12 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RDH11Q8TC12 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RDH11Q8TC12 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RDH11Q8TC12 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.28■□□□□ 0.84
RDH11Q8TC12 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RDH11Q8TC12 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms