Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD2Q8NHY2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RFWD2Q8NHY2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.4■□□□□ 0.86
RFWD2Q8NHY2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.4■□□□□ 0.86
RFWD2Q8NHY2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.4■□□□□ 0.86
RFWD2Q8NHY2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.4■□□□□ 0.86
RFWD2Q8NHY2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
RFWD2Q8NHY2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFWD2Q8NHY2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFWD2Q8NHY2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFWD2Q8NHY2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFWD2Q8NHY2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
RFWD2Q8NHY2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 SMG8-203ENST00000578922 2178 ntBASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 AC131212.1-201ENST00000613771 668 ntBASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RFWD2Q8NHY2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
RFWD2Q8NHY2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFWD2Q8NHY2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RFWD2Q8NHY2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms