Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 AC123595.1-201ENST00000440769 1046 ntBASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.81■□□□□ 0.92
CFAP61Q8NHU2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 MIR935-201ENST00000401179 91 ntBASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 CCDC92B-201ENST00000575506 885 ntBASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CFAP61Q8NHU2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 FEM1AP1-201ENST00000431297 1995 ntBASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 AC079140.4-201ENST00000507448 529 ntBASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 KRT18P14-201ENST00000534205 1250 ntBASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 AC104564.3-201ENST00000582367 638 ntBASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP61Q8NHU2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 RARRES2P6-201ENST00000567333 442 ntBASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 AC087623.3-201ENST00000607047 1098 ntBASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP61Q8NHU2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms