Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNAAF1Q8NEP3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNAAF1Q8NEP3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DNAAF1Q8NEP3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DNAAF1Q8NEP3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNAAF1Q8NEP3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.14■□□□□ 0.49
DNAAF1Q8NEP3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DNAAF1Q8NEP3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNAAF1Q8NEP3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 AC008406.3-201ENST00000620001 1374 ntBASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 AC009237.3-201ENST00000393279 1427 ntBASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
DNAAF1Q8NEP3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
DNAAF1Q8NEP3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 AC027682.1-201ENST00000562846 899 ntBASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.11■□□□□ 0.49
DNAAF1Q8NEP3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 AC112907.3-201ENST00000577781 2400 ntBASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 AC121338.2-201ENST00000622535 1744 ntBASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms