Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 AC110285.5-201ENST00000611501 352 ntBASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC168Q8NDH2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 TERF1P1-201ENST00000311003 1181 ntBASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 CDV3P1-201ENST00000471403 739 ntBASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC168Q8NDH2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 DUSP5P1-201ENST00000441325 1139 ntBASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 AL355355.2-201ENST00000442321 338 ntBASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 AC245052.3-201ENST00000450182 901 ntBASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 DUX4L26-201ENST00000489078 1255 ntBASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC168Q8NDH2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 MMP23A-201ENST00000234610 1017 ntBASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 AC091076.1-201ENST00000610741 619 ntBASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 AC087388.1-201ENST00000571370 1112 ntBASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC168Q8NDH2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 WWOX-216ENST00000569818 525 ntBASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 AF186192.3-201ENST00000583427 947 ntBASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 AC142381.3-201ENST00000568208 1670 ntBASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 AIRN-201ENST00000601203 4374 ntBASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC168Q8NDH2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.39■□□□□ 0.38
CCDC168Q8NDH2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC168Q8NDH2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC168Q8NDH2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC168Q8NDH2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 LINC01568-207ENST00000641790 1380 ntBASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 KRT18P56-201ENST00000507275 550 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms