Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 AL138781.1-201ENST00000566567 1274 ntBASIC24.12■■□□□ 1.45
PNMA1Q8ND90 AC142086.2-201ENST00000569753 217 ntBASIC24.12■■□□□ 1.45
PNMA1Q8ND90 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PNMA1Q8ND90 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PNMA1Q8ND90 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PNMA1Q8ND90 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 MIPEPP3-201ENST00000412105 444 ntBASIC24.09■■□□□ 1.45
PNMA1Q8ND90 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PNMA1Q8ND90 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 AC100791.3-201ENST00000617619 330 ntBASIC24.08■■□□□ 1.45
PNMA1Q8ND90 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PNMA1Q8ND90 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PNMA1Q8ND90 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PNMA1Q8ND90 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 AC011484.1-201ENST00000377652 1995 ntBASIC24.07■■□□□ 1.44
PNMA1Q8ND90 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
PNMA1Q8ND90 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.06■■□□□ 1.44
PNMA1Q8ND90 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.06■■□□□ 1.44
PNMA1Q8ND90 BX276092.2-201ENST00000417668 665 ntBASIC24.06■■□□□ 1.44
PNMA1Q8ND90 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PNMA1Q8ND90 AC098934.4-201ENST00000564127 592 ntBASIC24.06■■□□□ 1.44
PNMA1Q8ND90 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.06■■□□□ 1.44
PNMA1Q8ND90 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms