Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMRP1Q8NCR6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMRP1Q8NCR6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 RN7SL850P-201ENST00000579959 291 ntBASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 AL353708.3-201ENST00000610272 989 ntBASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SMRP1Q8NCR6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 AC005829.2-201ENST00000571422 1056 ntBASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.54■■□□□ 1.04
SMRP1Q8NCR6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 AC092053.2-201ENST00000640557 1818 ntBASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMRP1Q8NCR6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 AC093323.1-202ENST00000635031 2045 ntBASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMRP1Q8NCR6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMRP1Q8NCR6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.51■■□□□ 1.03
SMRP1Q8NCR6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 AC026471.5-201ENST00000615068 467 ntBASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 AC006557.6-201ENST00000623071 864 ntBASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMRP1Q8NCR6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms