Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 RNA5SP413-201ENST00000516373 109 ntBASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNEP1R1Q8N9A8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 AL355472.2-201ENST00000422958 438 ntBASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 AC097658.1-201ENST00000475555 843 ntBASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNEP1R1Q8N9A8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNEP1R1Q8N9A8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
CNEP1R1Q8N9A8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.33■□□□□ 0.53
CNEP1R1Q8N9A8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
CNEP1R1Q8N9A8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNEP1R1Q8N9A8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNEP1R1Q8N9A8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNEP1R1Q8N9A8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNEP1R1Q8N9A8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CNEP1R1Q8N9A8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 TSPY20P-201ENST00000450910 630 ntBASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.33■□□□□ 0.52
CNEP1R1Q8N9A8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 ABHD17AP1-201ENST00000358206 933 ntBASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 DUSP5P2-201ENST00000426873 1033 ntBASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 AC116050.2-201ENST00000612102 1779 ntBASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNEP1R1Q8N9A8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms