Protein–RNA interactions for Protein: Q8IZA3

H1FOO, Histone H1oo, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1FOOQ8IZA3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1FOOQ8IZA3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 AC011484.1-201ENST00000377652 1995 ntBASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 AP004607.4-201ENST00000530158 1459 ntBASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 RASA4CP-201ENST00000424092 1398 ntBASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
H1FOOQ8IZA3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 FP700111.2-201ENST00000619190 1892 ntBASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 AC008406.3-201ENST00000620001 1374 ntBASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1FOOQ8IZA3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 AC061975.6-201ENST00000579045 1553 ntBASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 MIR939-201ENST00000401314 82 ntBASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 AC012414.1-201ENST00000556676 535 ntBASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 AL355001.2-201ENST00000620617 1191 ntBASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1FOOQ8IZA3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 AF213884.3-201ENST00000563833 479 ntBASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.1■□□□□ 0.33
H1FOOQ8IZA3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1FOOQ8IZA3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1FOOQ8IZA3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H1FOOQ8IZA3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1FOOQ8IZA3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1FOOQ8IZA3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.09■□□□□ 0.33
H1FOOQ8IZA3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms