Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK2Q86Y07 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.1■□□□□ 0.65
VRK2Q86Y07 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.1■□□□□ 0.65
VRK2Q86Y07 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK2Q86Y07 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK2Q86Y07 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VRK2Q86Y07 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VRK2Q86Y07 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VRK2Q86Y07 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 AC027702.1-201ENST00000563810 1770 ntBASIC19.09■□□□□ 0.65
VRK2Q86Y07 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 SLC7A5P2-201ENST00000553010 536 ntBASIC19.09■□□□□ 0.65
VRK2Q86Y07 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 GABARAPL3-202ENST00000624044 1851 ntBASIC19.09■□□□□ 0.65
VRK2Q86Y07 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VRK2Q86Y07 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK2Q86Y07 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK2Q86Y07 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK2Q86Y07 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK2Q86Y07 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK2Q86Y07 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VRK2Q86Y07 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 KRT18P14-201ENST00000534205 1250 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 DUX4L2-201ENST00000561772 1275 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 AP001160.3-201ENST00000601484 763 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 DUX4L6-201ENST00000626483 1275 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 DUX4L1-201ENST00000627662 1275 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 DUX4L8-201ENST00000629013 1275 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 DUX4L3-201ENST00000630187 1275 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 DUX4L7-201ENST00000630678 1275 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 DUX4L5-201ENST00000630834 1275 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK2Q86Y07 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK2Q86Y07 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK2Q86Y07 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 KRT16P2-201ENST00000414673 1423 ntBASIC19.08■□□□□ 0.64
VRK2Q86Y07 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
VRK2Q86Y07 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.07■□□□□ 0.64
VRK2Q86Y07 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VRK2Q86Y07 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VRK2Q86Y07 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.07■□□□□ 0.64
VRK2Q86Y07 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.07■□□□□ 0.64
VRK2Q86Y07 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
VRK2Q86Y07 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.07■□□□□ 0.64
VRK2Q86Y07 AC120498.10-201ENST00000621827 505 ntBASIC19.07■□□□□ 0.64
VRK2Q86Y07 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.07■□□□□ 0.64
VRK2Q86Y07 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VRK2Q86Y07 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VRK2Q86Y07 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VRK2Q86Y07 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.06■□□□□ 0.64
VRK2Q86Y07 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms