Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LDB1Q86U70 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDB1Q86U70 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDB1Q86U70 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDB1Q86U70 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDB1Q86U70 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LDB1Q86U70 KRT19P1-201ENST00000405746 1186 ntBASIC20.63■□□□□ 0.89
LDB1Q86U70 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.63■□□□□ 0.89
LDB1Q86U70 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.63■□□□□ 0.89
LDB1Q86U70 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDB1Q86U70 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LDB1Q86U70 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LDB1Q86U70 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LDB1Q86U70 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LDB1Q86U70 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LDB1Q86U70 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.62■□□□□ 0.89
LDB1Q86U70 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDB1Q86U70 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LDB1Q86U70 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDB1Q86U70 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LDB1Q86U70 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.62■□□□□ 0.89
LDB1Q86U70 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.62■□□□□ 0.89
LDB1Q86U70 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
LDB1Q86U70 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LDB1Q86U70 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LDB1Q86U70 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.62■□□□□ 0.89
LDB1Q86U70 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.62■□□□□ 0.89
LDB1Q86U70 UBE2DNL-204ENST00000602536 740 ntBASIC20.62■□□□□ 0.89
LDB1Q86U70 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.62■□□□□ 0.89
LDB1Q86U70 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LDB1Q86U70 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDB1Q86U70 AC092667.1-201ENST00000434301 2586 ntBASIC20.62■□□□□ 0.89
LDB1Q86U70 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LDB1Q86U70 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDB1Q86U70 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.61■□□□□ 0.89
LDB1Q86U70 KRT18P5-201ENST00000436075 1291 ntBASIC20.61■□□□□ 0.89
LDB1Q86U70 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.61■□□□□ 0.89
LDB1Q86U70 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.61■□□□□ 0.89
LDB1Q86U70 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDB1Q86U70 LINC01006-201ENST00000333319 2292 ntBASIC20.61■□□□□ 0.89
LDB1Q86U70 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.6■□□□□ 0.89
LDB1Q86U70 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.6■□□□□ 0.89
LDB1Q86U70 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LDB1Q86U70 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.6■□□□□ 0.89
LDB1Q86U70 AC245052.3-201ENST00000450182 901 ntBASIC20.6■□□□□ 0.89
LDB1Q86U70 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.6■□□□□ 0.89
LDB1Q86U70 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 KRT18P20-201ENST00000548986 1279 ntBASIC20.6■□□□□ 0.89
LDB1Q86U70 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.6■□□□□ 0.89
LDB1Q86U70 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.6■□□□□ 0.89
LDB1Q86U70 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
LDB1Q86U70 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDB1Q86U70 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LDB1Q86U70 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LDB1Q86U70 FEM1AP1-201ENST00000431297 1995 ntBASIC20.59■□□□□ 0.89
LDB1Q86U70 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LDB1Q86U70 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LDB1Q86U70 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LDB1Q86U70 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LDB1Q86U70 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.59■□□□□ 0.89
LDB1Q86U70 AC011484.1-201ENST00000377652 1995 ntBASIC20.59■□□□□ 0.89
LDB1Q86U70 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LDB1Q86U70 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LDB1Q86U70 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LDB1Q86U70 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LDB1Q86U70 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LDB1Q86U70 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.58■□□□□ 0.89
LDB1Q86U70 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LDB1Q86U70 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LDB1Q86U70 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LDB1Q86U70 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms