Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDK1Q7Z5N4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.57■□□□□ 0.88
SDK1Q7Z5N4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDK1Q7Z5N4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.57■□□□□ 0.88
SDK1Q7Z5N4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 FAM21FP-204ENST00000608637 956 ntBASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 AC097493.4-201ENST00000641197 219 ntBASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDK1Q7Z5N4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 AC133681.1-201ENST00000465482 601 ntBASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 AC233702.5-201ENST00000584107 538 ntBASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 AC124016.1-201ENST00000609552 612 ntBASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 AC239809.2-201ENST00000415381 517 ntBASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDK1Q7Z5N4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 AC120498.8-201ENST00000614275 531 ntBASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDK1Q7Z5N4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 AC087499.1-201ENST00000418141 1075 ntBASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 AC092053.2-201ENST00000640557 1818 ntBASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.53■□□□□ 0.88
SDK1Q7Z5N4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 AC012306.2-201ENST00000609350 630 ntBASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SDK1Q7Z5N4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms