Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 AC027702.1-201ENST00000563810 1770 ntBASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 AC135279.3-201ENST00000610945 1311 ntBASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCHD4Q6ZW05 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 AC126544.1-201ENST00000580842 1059 ntBASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCHD4Q6ZW05 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 AC020907.5-201ENST00000624372 1936 ntBASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCHD4Q6ZW05 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 RNF165-205ENST00000588679 2904 ntBASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 IGHV3-19-201ENST00000521488 291 ntBASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 AC007225.1-201ENST00000566331 1836 ntBASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCHD4Q6ZW05 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 AC096631.2-201ENST00000436136 790 ntBASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 AC008764.7-201ENST00000593779 1081 ntBASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms