Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00575Q6W349 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00575Q6W349 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00575Q6W349 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00575Q6W349 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00575Q6W349 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00575Q6W349 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LINC00575Q6W349 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00575Q6W349 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00575Q6W349 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00575Q6W349 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00575Q6W349 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 RARRES2P2-201ENST00000394842 485 ntBASIC13.09□□□□□ -0.31
LINC00575Q6W349 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 MIR4508-201ENST00000584178 70 ntBASIC13.09□□□□□ -0.31
LINC00575Q6W349 FP700111.2-201ENST00000619190 1892 ntBASIC13.09□□□□□ -0.31
LINC00575Q6W349 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC00575Q6W349 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00575Q6W349 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00575Q6W349 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00575Q6W349 AC133637.1-201ENST00000624115 1537 ntBASIC13.08□□□□□ -0.31
LINC00575Q6W349 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00575Q6W349 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
LINC00575Q6W349 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00575Q6W349 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00575Q6W349 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00575Q6W349 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 AC010141.3-201ENST00000456659 717 ntBASIC13.08□□□□□ -0.32
LINC00575Q6W349 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00575Q6W349 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00575Q6W349 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00575Q6W349 Z92544.1-202ENST00000571933 1220 ntBASIC13.08□□□□□ -0.32
LINC00575Q6W349 AC010980.1-201ENST00000587192 1142 ntBASIC13.08□□□□□ -0.32
LINC00575Q6W349 AL451085.2-201ENST00000605085 799 ntBASIC13.08□□□□□ -0.32
LINC00575Q6W349 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00575Q6W349 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00575Q6W349 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00575Q6W349 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 AP004607.7-201ENST00000527152 1677 ntBASIC13.08□□□□□ -0.32
LINC00575Q6W349 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00575Q6W349 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00575Q6W349 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms