Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.86■□□□□ 0.93
PACS1Q6VY07 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.86■□□□□ 0.93
PACS1Q6VY07 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.86■□□□□ 0.93
PACS1Q6VY07 RARRES2P6-201ENST00000567333 442 ntBASIC20.86■□□□□ 0.93
PACS1Q6VY07 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PACS1Q6VY07 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PACS1Q6VY07 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PACS1Q6VY07 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PACS1Q6VY07 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 AC034268.1-201ENST00000441047 882 ntBASIC20.85■□□□□ 0.93
PACS1Q6VY07 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PACS1Q6VY07 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 AC138907.5-202ENST00000569484 235 ntBASIC20.85■□□□□ 0.93
PACS1Q6VY07 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 AC087623.3-201ENST00000607047 1098 ntBASIC20.85■□□□□ 0.93
PACS1Q6VY07 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PACS1Q6VY07 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PACS1Q6VY07 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PACS1Q6VY07 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PACS1Q6VY07 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.85■□□□□ 0.93
PACS1Q6VY07 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PACS1Q6VY07 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
PACS1Q6VY07 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PACS1Q6VY07 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PACS1Q6VY07 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PACS1Q6VY07 AP004607.4-201ENST00000530158 1459 ntBASIC20.83■□□□□ 0.93
PACS1Q6VY07 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.83■□□□□ 0.93
PACS1Q6VY07 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.83■□□□□ 0.93
PACS1Q6VY07 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.83■□□□□ 0.93
PACS1Q6VY07 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.83■□□□□ 0.93
PACS1Q6VY07 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.83■□□□□ 0.93
PACS1Q6VY07 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PACS1Q6VY07 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PACS1Q6VY07 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.83■□□□□ 0.92
PACS1Q6VY07 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.83■□□□□ 0.92
PACS1Q6VY07 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PACS1Q6VY07 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PACS1Q6VY07 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PACS1Q6VY07 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PACS1Q6VY07 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.83■□□□□ 0.92
PACS1Q6VY07 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PACS1Q6VY07 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACS1Q6VY07 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
PACS1Q6VY07 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACS1Q6VY07 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PACS1Q6VY07 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACS1Q6VY07 AC004854.2-201ENST00000608450 1441 ntBASIC20.82■□□□□ 0.92
PACS1Q6VY07 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACS1Q6VY07 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PACS1Q6VY07 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.82■□□□□ 0.92
PACS1Q6VY07 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
PACS1Q6VY07 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACS1Q6VY07 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PACS1Q6VY07 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACS1Q6VY07 AC027702.1-201ENST00000563810 1770 ntBASIC20.82■□□□□ 0.92
PACS1Q6VY07 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PACS1Q6VY07 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PACS1Q6VY07 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PACS1Q6VY07 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms