Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 AL049796.1-201ENST00000565336 1766 ntBASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 AC004854.2-201ENST00000608450 1441 ntBASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN4Q6PJG9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 AC087623.3-201ENST00000607047 1098 ntBASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRFN4Q6PJG9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 KRT18P61-201ENST00000585825 1298 ntBASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN4Q6PJG9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRFN4Q6PJG9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 POU5F1P4-201ENST00000413175 1085 ntBASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 AC026271.2-201ENST00000428091 497 ntBASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 AC010141.2-201ENST00000452426 721 ntBASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 AP001160.3-201ENST00000601484 763 ntBASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 AC008175.2-201ENST00000612840 297 ntBASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.51■□□□□ 0.55
LRFN4Q6PJG9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms